收藏本站
收藏 | 手机打开
二维码
手机客户端打开本文

Genetic basis analysis for indica germinability under low temperature using a new RILs population genotyping by whole-genome resequencing

Peng Wang  Guangliang Wu  Xin Luo  Ruiqi Liu  ong Zou  Yicong Cai  Dahu zhou  Jingai Tan  Xiangyu Zhang  Caijin Li  Cuijuan Li  Yanning Wang  Qin Cheng  Haohua He  Jianmin Bian  
【摘要】:To evaluate the cold tolerance of indica rice at germination stage, a recombinant inbred lines(RILs) population comprising 126 lines derived from two widely used double-cropped indica rice varieties Wufeng B(WFB) and Changhui T025(CHT025) was developed. Meanwhile, a high-density genetic map including 2578 bins covering distance of 1762.8 cM with an average of 0.68 cM between markers was generated through whole-genome resequencing approach. On the basis of newly constructed high-density genetic map, a total of 18 additive QTLs ranging from 49.78 to 315.21 kb on Nipponbare genome and two pairs of epistatic QTLs associated with cold stress were detected, which indicated that the genetic basis of cold tolerance of WFB and CHT025 at germination stage is manly due to additive effects of several QTLs. Otherwise, the phylogenetic analysis showed that WFB is a typical indica variety while CHT025 is an interphyletic rice variety. Most of the favorable QTLs harbouring in WFB detected in this study showed different chromosomal region from the QTLs associating with cold stress from japonica rice in previous studies, which indicated that indica might have different cold stress genetic mechanism comparing to japonica subspecies. Furthermore, we can incorporate these favorable QTLs exist in WFB into rice varieties to breed new cold tolerance indica male sterile maintenance line via marker-assisted selection; CHT025 is a better source of these cold tolerance favorable QTLs only only for the improvement of indcia but also for japonica restorer line germinability under low temperature via marker-assisted selection.

知网文化
【相似文献】
中国期刊全文数据库 前20条
1 Mohammad Reza Abai;Mohammad Ali Oshaghi;Leila Tajedin;Yavar Rassi;Amir Ahmad Akhavan;;Geographical distribution and ecological features of the great gerbil subspecies in the main zoonotic cutaneous leishmaniasis foci in Iran[J];Asian Pacific Journal of Tropical Medicine;2010年10期
2 ;Aninter-subspecies hybrid rice—Liangyou-Peijiu[J];Chinese Rice Research Newsletter;2000年02期
3 ;An inter-subspecies hybrid rice-Liangyou-Peijiu[J];Chinese Rice Research Newsletter;2000年02期
4 ;SOME NEW SPECIES OF RHOPALOCERA IN CHINA. Ⅲ[J];动物学报;1963年01期
5 ;SUBSPECIFIC DIFFERENTIATION OF THE TWO SIBLING SPECIESOF THE NECKLACED LAUGHING-THRUSHES (GARRULAXPECTORALIS AND G. MONILIGERUS) IN CHINA,INCLUDING A NEW SUBSPECIES --GARRULAX PECTORALIS PINGI[J];动物学报;1963年03期
6 ;东北虎(英文)[J];Women of China;2002年06期
7 Jér?me Fuchs;Dario Zuccon;;On the genetic distinctiveness of tailorbirds(Cisticolidae: Orthotomus) from the South-east Asian mainland with the description of a new subspecies[J];Avian Research;2018年03期
8 ;SUBSPECIFIC DIFFERENTIATION OF THE RED-WINGED SHRIKE-BABBLER (PTERUTHIUS FLAVISCAPIS) IN CHINA, INCLUDING A NEW SUBSPECIES P. F. LINGSHUIENSIS[J];动物学报;1963年04期
9 Haixia Lu;Xin Jiang;Qiang Li;Li Ma;;A new species and a new record subspecies of Ceropales Latreille,with a key to the genus from China(Hymenoptera:Pompilidae)[J];Zoological Systematics;2016年03期
10 ;Genetic Relationship between Francisella Tularensis Strains from China and from Other Countries[J];Biomedical and Environmental Sciences;2011年03期
11 ;NEW SPECIES AND SUBSPECIES OF CHINESE PLATYCORYNUS (COLEOPTERA: EUMOLPIDAE)[J];动物分类学报;1982年03期
12 FEI Cheng;XU Quan;XU Zhengjin;CHEN Wenfu;;Effect of Rice Breeding Process on Improvement of Yield and Quality in China[J];Rice Science;2020年05期
13 Rastegar-Pouyani NASRULLAH;Karamiani RASOUL;Oraei HAMZEH;Khosrawani AZAR;Rastegar-Pouyani ESKANDAR;;A New Subspecies of Darevskia raddei(Boettger,1892)(Sauria:Lacertidae)from the West Azerbaijan Province,Iran[J];Asian Herpetological Research;2011年04期
14 Klaus Dieter SCHULZ;Frank TILLACK;Abhijit DAS;Notker HELFENBERGER;;On the Identity and Taxonomic Status of Coluber nuthalli Theobald, 1868, with Redescription of the Type Specimens of Coluber nuthalli and Elaphis yunnanensis Anderson, 1879(Reptilia, Squamata, Colubridae)[J];Asian Herpetological Research;2015年01期
15 Lucy C Stewart;Andrew S Day;John Pearson;Murray L Barclay;Richard B Gearry;Rebecca L Roberts;Robert W Bentley;;SLC11A1 polymorphisms in inflammatory bowel disease and Mycobacterium avium subspecies paratuberculosis status[J];World Journal of Gastroenterology;2010年45期
16 ;THE TAXON0MY AND DISTRIBUTI0N 0F THE GIBBONS IN SOUTHERN CHINA AND ITS ADJACENT REGION-WITH DESCRIPTI0N OF THREE NEW SUBSPECIES[J];动物学研究;1986年04期
17 J.Y. Asibuo;R. Akromah;O. Safo-Kantanka;H.K. Adu-Dapaah;;Genetic Diversity of Peanut Core Collection from US Using Simple Sequence Repeats[J];分子植物育种;2007年02期
18 ;Relationship between PSII-D1-protein,xanthophyll cycle and the differences in capacities related to photoda mage-resistance of indica and japonica subspecies of rice(O.sativaL.)[J];Chinese Rice Research Newsletter;2000年02期
19 John Hermon-Taylor;;Mycobacterium avium subspecies paratuberculosis in the causation of Crohn's disease[J];World Journal of Gastroenterology;2000年05期
20 Leonardo A Sechi;Maria Gazouli;Lee E Sieswerda;Paola Molicotti;Niyaz Ahmed;John Ikonomopoulos;Antonio M Scanu;Daniela Paccagnini;Stefania Zanetti;;Relationship between Crohn’s disease, infection with Mycobacterium avium subspecies paratuberculosis and SLC11A1 gene polymorphisms in Sardinian patients[J];World Journal of Gastroenterology;2006年44期
中国重要会议论文全文数据库 前20条
1 Peng Wang;Guangliang Wu;Xin Luo;Ruiqi Liu;ong Zou;Yicong Cai;Dahu zhou;Jingai Tan;Xiangyu Zhang;Caijin Li;Cuijuan Li;Yanning Wang;Qin Cheng;Haohua He;Jianmin Bian;;Genetic basis analysis for indica germinability under low temperature using a new RILs population genotyping by whole-genome resequencing[A];江西省作物学会2020年学术年会论文摘要集[C];2020年
2 Kun-Peng Li;Yun-Xiang Wu;Hong Zhao;Yan Wang;Xing-Ming Lü;Ji-Ming Wang;Yong Xu;Zong-Yun Li;Yong-Hua Han;;Cytogenetic relationships among Citrullus species in comparison with some genera of the tribe Benincaseae(Cucurbitaceae) as inferred from rDNA distribution patterns[A];江苏省遗传学会2016年学术年会论文摘要集[C];2016年
3 Xin Wang;Gen Fang;Yang Li;Meng Ding;Hanyu Gong;Yangsheng Li;;Differential antioxidant responses to cold stress in cell suspension cultures of two subspecies of rice[A];中国遗传学会第九次全国会员代表大会暨学术研讨会论文摘要汇编(2009-2013)[C];2013年
4 ;The Evolutionary History of Rice Genomes[A];2009整合植物生物学研讨会摘要集[C];2009年
5 ;The Rice Genome:Understanding the Progression From Sequence to Protein to Function[A];中国蛋白质组学第二届学术大会论文摘要论文集[C];2004年
6 郭洁;Chuanguang Liu;Xinqiao Zhou;Dagang Chen;Pingli Chen;Kangli Sun;Guang Tang;Guiquan Zhang;Youding Chen;;Genetic effect of three ORFs at S5 loci,to regulate the reproductive isolation in indica-japonica subspecies of rice[A];2018中国作物学会学术年会论文摘要集[C];2018年
7 ;Characterization of Baylisascaris schroederi from Qinling subspecies of giant panda in China by the first internal transcribed spacer(ITS-1)of nuclear ribosomal DNA[A];中国畜牧兽医学会家畜寄生虫学分会第六次代表大会暨第十一次学术研讨会论文集[C];2011年
8 ;No Additional South China Tiger Remained:A Genetic Investigation of Suspected South China Tigers[A];野生动物生态与资源保护第三届全国学术研讨会论文摘要集[C];2006年
9 Tariq Hussain;Deming Zhao;Syed Zahid Ali Shah;Jie Wang;Ruichao Yue;Yi Liao;Naveed Sabir;Lifeng Yang;Xiangmei Zhou;;Microrna 27a-3p regulates antimicrobial responses of Murine Macrophages infected by Mycobacterium avium subspecies paratuberculosis by Targeting interleukin-10 and TgF-β-activated Protein Kinase 1 Binding Protein 2[A];中国畜牧兽医学会兽医病理学分会第二十四次学术研讨会、中国病理生理学会动物病理生理学专业委员会第二十三次学术研讨会、中国实验动物学会实验病理学专业委员会第三次学术研讨会、中国兽医病理学家第三次学术研讨会论文集[C];2018年
10 张兰兰;鈴木紀毅;;印度洋东北部全新世pylonioid类放射虫的分类及其种类多样性(英文)[A];中国古生物学会第十二次全国会员代表大会暨第29届学术年会论文摘要集[C];2018年
11 Liang Gao;Jiwei Chang;Zongliang Hu;Linlin Chen;Fei Zhou;;Genome-wide analysis of plastid gene expression covering the entire life cycle of rice:difference between japonica rice Nipponbare and indica rice MH63[A];第十四届全国植物基因组学大会摘要[C];2013年
12 ;Isolation and functional analysis of CS-2b gene for chlorate sensitivity in rice[A];遗传学与社会可持续发展——2010中国青年遗传学家论坛论文摘要汇编[C];2010年
13 ;Male and female gamete abortions, and reduced affinity between the uniting gametes as the causes for Sterility in an indica/japonica hybrid in rice[A];湖北省遗传学会第七次代表大会暨学术讨论会论文摘要集[C];2004年
14 ;Chromosomal polymorphisms due to the addition of heterochromatin and pericentric inversions in white-bellied rat, Niviventer confucianus, from China[A];中国动物学会兽类学分会第六届会员代表大会暨学术讨论会论文摘要集[C];2004年
15 ;A Comparative Analysis of the Endosperm Proteins Separated by Two-dimensional Electrophoresis for two Cultivars of hybrid Rice (Oryza saliva)[A];首届全国蛋白质组学学术研讨会论文集[C];2005年
16 Shouchuang Wang;Fangying Chuan;Jie Luo;;Exploring the metabolic diversity in major crops-from functional genomics to functional metabolomics[A];2018全国植物生物学大会论文集[C];2018年
17 ;A Checklist of Guangdong Bryophytes[A];第七届全国系统与进化植物学青年学术研讨会论文摘要集[C];2002年
18 Manyuan Long;;New Gene Evolution in Plants[A];第十届全国小麦基因组学及分子育种大会摘要集[C];2019年
19 ;Preliminary Review of Chinese Amblystegiaceae[A];第七届全国系统与进化植物学青年学术研讨会论文摘要集[C];2002年
20 ;A NEW SUBSPECIES OF GIANT PANDA (Ailuropoda melanoleuca) FROM SHAANXI CHINA[A];中国动物学会兽类学分会第六届会员代表大会暨学术讨论会论文摘要集[C];2004年
中国博士学位论文全文数据库 前1条
1 Kyalo Cornelius Mulili;从种群遗传学、系统地理学和系统基因组学等方面研究Strepiocarpus ionanthus(苦苣苔科)种内复杂的演化关系[D];中国科学院大学(中国科学院武汉植物园);2020年
中国硕士学位论文全文数据库 前3条
1 马兰;人感染新斑点热群立克次体的发现及自然疫源地调查研究[D];中国人民解放军军事医学科学院;2015年
2 徐丽慧;水稻细菌性谷枯病菌的分子检测及细菌性褐条病病原鉴定研究[D];浙江大学;2008年
3 罗远;中国克罗恩病患者与副结核分枝杆菌的相关性研究[D];浙江大学;2012年
中国知网广告投放
 快捷付款方式  订购知网充值卡  订购热线  帮助中心
  • 400-819-9993
  • 010-62982499
  • 010-62783978